STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM135AFamily with sequence similarity 135 member A. (1516 aa)    
Predicted Functional Partners:
SERAC1
Serine active site containing 1.
   
  
 0.639
ABHD8
Abhydrolase domain containing 8.
   
  
 0.625
ABHD13
Abhydrolase domain containing 13.
      
 0.623
ABHD16A
Abhydrolase domain containing 16A.
   
  
 0.582
QRSL1
Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the amidase family. GatA subfamily.
      
 0.576
ABHD12B
Abhydrolase domain containing 12B.
      
 0.572
RND1
Rho-related GTP-binding protein Rho6.
    
 0.571
COL9A1
Collagen type IX alpha 1 chain.
      
 0.566
ABHD10
Alpha/beta hydrolase domain-containing protein 10, mitochondrial isoform 1.
      
 0.526
LYPLAL1
Lysophospholipase like 1.
      
 0.522
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.