STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLF17Kruppel like factor 17. (414 aa)    
Predicted Functional Partners:
TFCP2L1
Transcription factor CP2 like 1.
    
 
 0.794
SOX17
SRY-box transcription factor 17.
    
 0.643
ESRRB
Estrogen related receptor beta.
    
 0.642
NANOG
Homeobox domain-containing protein.
    
 0.633
GATA6
GATA binding protein 6.
    
 0.613
POU5F1-2
Uncharacterized protein.
    
 0.607
POU5F1
POU-specific domain-containing protein.
    
 0.606
SOX2
Transcription factor SOX-2.
    
 0.603
SALL2
Spalt like transcription factor 2.
    
 0.593
DPPA5
MOEP19 domain-containing protein.
      
 0.589
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.