STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OFD1OFD1 centriole and centriolar satellite protein. (1005 aa)    
Predicted Functional Partners:
SCLT1
Sodium channel and clathrin linker 1.
      
 0.789
CEP83
Centrosomal protein 83.
   
 0.762
CEP164
Centrosomal protein 164.
   
 0.735
PLK1
Serine/threonine-protein kinase PLK.
   
 0.728
C2CD3
C2 domain containing 3 centriole elongation regulator.
    
 0.719
FBF1
Fas binding factor 1.
    
 0.713
CEP120
Centrosomal protein of 120 kDa isoform 1.
    
 0.671
NDE1
NudE neurodevelopment protein 1.
    
 
 0.670
CEP126
Centrosomal protein 126.
    
 0.653
CEP76
Centrosomal protein 76.
    
 
 0.650
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.