UNC5CL protein (Callithrix jacchus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

UNC5CL

Unc-5 family C-terminal like. (518 aa)

Predicted Functional Partners:

LPHN1

0.987

ADGRL2

0.987

ADGRL3

0.987

IGDCC3

0.480

IGDCC4

0.480

NEO1

0.480

DCC

0.480

EVA1C

0.471

FNDC1

0.457

TNFRSF13C

0.424

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADGRL2	UNC5CL	ENSCJAP00000043135	ENSCJAP00000007352	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Unc-5 family C-terminal like.	0.987
ADGRL3	UNC5CL	ENSCJAP00000055771	ENSCJAP00000007352	Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family.	Unc-5 family C-terminal like.	0.987
DCC	UNC5CL	ENSCJAP00000071374	ENSCJAP00000007352	DCC netrin 1 receptor.	Unc-5 family C-terminal like.	0.480
EVA1C	UNC5CL	ENSCJAP00000078465	ENSCJAP00000007352	Eva-1 homolog C.	Unc-5 family C-terminal like.	0.471
FNDC1	UNC5CL	ENSCJAP00000043145	ENSCJAP00000007352	Fibronectin type III domain containing 1.	Unc-5 family C-terminal like.	0.457
IGDCC3	UNC5CL	ENSCJAP00000012868	ENSCJAP00000007352	Immunoglobulin superfamily DCC subclass member 3.	Unc-5 family C-terminal like.	0.480
IGDCC4	UNC5CL	ENSCJAP00000012906	ENSCJAP00000007352	Immunoglobulin superfamily DCC subclass member 4.	Unc-5 family C-terminal like.	0.480
LPHN1	UNC5CL	ENSCJAP00000008932	ENSCJAP00000007352	Adhesion G protein-coupled receptor L1; Belongs to the G-protein coupled receptor 2 family.	Unc-5 family C-terminal like.	0.987
NEO1	UNC5CL	ENSCJAP00000033569	ENSCJAP00000007352	Neogenin isoform 1.	Unc-5 family C-terminal like.	0.480
TNFRSF13C	UNC5CL	ENSCJAP00000004278	ENSCJAP00000007352	TNF receptor superfamily member 13C.	Unc-5 family C-terminal like.	0.424
UNC5CL	ADGRL2	ENSCJAP00000007352	ENSCJAP00000043135	Unc-5 family C-terminal like.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.987
UNC5CL	ADGRL3	ENSCJAP00000007352	ENSCJAP00000055771	Unc-5 family C-terminal like.	Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family.	0.987
UNC5CL	DCC	ENSCJAP00000007352	ENSCJAP00000071374	Unc-5 family C-terminal like.	DCC netrin 1 receptor.	0.480
UNC5CL	EVA1C	ENSCJAP00000007352	ENSCJAP00000078465	Unc-5 family C-terminal like.	Eva-1 homolog C.	0.471
UNC5CL	FNDC1	ENSCJAP00000007352	ENSCJAP00000043145	Unc-5 family C-terminal like.	Fibronectin type III domain containing 1.	0.457
UNC5CL	IGDCC3	ENSCJAP00000007352	ENSCJAP00000012868	Unc-5 family C-terminal like.	Immunoglobulin superfamily DCC subclass member 3.	0.480
UNC5CL	IGDCC4	ENSCJAP00000007352	ENSCJAP00000012906	Unc-5 family C-terminal like.	Immunoglobulin superfamily DCC subclass member 4.	0.480
UNC5CL	LPHN1	ENSCJAP00000007352	ENSCJAP00000008932	Unc-5 family C-terminal like.	Adhesion G protein-coupled receptor L1; Belongs to the G-protein coupled receptor 2 family.	0.987
UNC5CL	NEO1	ENSCJAP00000007352	ENSCJAP00000033569	Unc-5 family C-terminal like.	Neogenin isoform 1.	0.480
UNC5CL	TNFRSF13C	ENSCJAP00000007352	ENSCJAP00000004278	Unc-5 family C-terminal like.	TNF receptor superfamily member 13C.	0.424