STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APEHAcylaminoacyl-peptide hydrolase. (737 aa)    
Predicted Functional Partners:
PREP
Prolyl endopeptidase.
   
 
 0.714
PREPL
Prolyl endopeptidase-like isoform 1.
   
 
 0.707
DPP7
Dipeptidyl peptidase 7.
      
 0.650
BSN
Bassoon presynaptic cytomatrix protein.
 
    
 0.644
NCSTN
Nicastrin.
   
  
 0.589
PRCP
Prolylcarboxypeptidase.
      
 0.540
FAM234A
Family with sequence similarity 234 member A.
      
 0.511
UTP11
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
      
 0.509
GHRL
Appetite-regulating hormone isoform 1 preproprotein.
   
 
 0.495
TRIP12
Uncharacterized protein.
      
 0.493
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.