STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D17TBC1 domain family member 17. (643 aa)    
Predicted Functional Partners:
TBC1D15
TBC1 domain family member 15 isoform 1.
  
 
 
0.669
RAB7B
Uncharacterized protein.
   
 0.663
GABARAPL2
Gamma-aminobutyric acid receptor-associated protein-like 2.
   
 0.645
CLDN15
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
    
 
 0.640
CCDC121
Coiled-coil domain-containing protein 121 isoform 2.
    
   0.614
TBC1D10C
TBC1 domain family member 10C.
   
  
0.578
MAP1LC3B
Microtubule-associated proteins 1A/1B light chain 3B.
   
 0.564
TBC1D8
TBC1 domain family member 8.
   
  
 0.559
TBC1D19
TBC1 domain family member 19.
      
 0.551
GABARAP
Gamma-aminobutyric acid receptor-associated protein.
   
 0.549
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.