STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNMDTenomodulin. (317 aa)    
Predicted Functional Partners:
ENSCJAP00000072738
Uncharacterized protein.
      
 0.735
DCN
Decorin; May affect the rate of fibrils formation.
     
 0.733
FMOD
Fibromodulin.
   
 
 0.628
KERA
Keratocan.
   
 
 0.620
BGN
Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.
   
 
 0.611
SCX
Basic helix-loop-helix transcription factor scleraxis.
      
 0.596
MKX
Homeobox protein Mohawk.
      
 0.578
LNX1
Ligand of numb-protein X 1.
      
 0.499
COL1A1
Collagen alpha-1(I) chain preproprotein.
   
  
 0.458
RUNX2
RUNX family transcription factor 2.
      
 0.457
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.