STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC2D1ACoiled-coil and C2 domain containing 1A. (1036 aa)    
Predicted Functional Partners:
CHMP4C
Charged multivesicular body protein 4C.
    
 0.868
CHMP6
Charged multivesicular body protein 6.
     
 0.844
CHMP4B
Charged multivesicular body protein 4B.
    
 0.784
TM9SF1
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
    
 0.738
CHMP3
Uncharacterized protein.
     
 0.698
VPS4B
Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.
     
 0.694
CHMP2A
Charged multivesicular body protein 2A.
     
 0.692
CHMP7
Charged multivesicular body protein 7.
     
 0.685
CHMP5
Charged multivesicular body protein 5 isoform 1.
      
 0.666
VPS4A
Uncharacterized protein; Belongs to the AAA ATPase family.
     
 0.661
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.