STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAIPTRAF interacting protein. (469 aa)    
Predicted Functional Partners:
SPRTN
SprT-like N-terminal domain.
      
 0.827
TRAF2
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 
 0.683
LRR1
Leucine rich repeat protein 1.
   
 
 0.680
FANCD2
FA complementation group D2.
   
 
 0.670
NEIL3
Nei like DNA glycosylase 3.
   
  
 0.628
TEX264
Testis expressed 264, ER-phagy receptor.
      
 0.568
TRAF1
TNF receptor-associated factor.
    
 
 0.556
CYLD
Ubiquitin carboxyl-terminal hydrolase CYLD isoform 1; Belongs to the peptidase C19 family.
    
 
 0.551
FBXO5
F-box protein 5.
   
  
 0.548
TATDN3
TatD DNase domain containing 3.
      
 0.547
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.