STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPM1Tropomyosin alpha-1 chain isoform 2; Belongs to the tropomyosin family. (326 aa)    
Predicted Functional Partners:
TNNT2
Troponin T2, cardiac type.
   
 0.980
TNNI3
Uncharacterized protein.
   
 0.972
ACTC1
Uncharacterized protein.
   
 0.946
MYL1
Myosin light chain 1.
   
 0.802
ENSCJAP00000076943
Uncharacterized protein.
   
 0.737
TNNC1
Troponin C1, slow skeletal and cardiac type.
   
 0.707
ENSCJAP00000062176
Uncharacterized protein.
   
 0.671
ENSCJAP00000072509
Uncharacterized protein.
   
 0.671
SMIM20
Small integral membrane protein 20.
   
 0.664
MYH10
Myosin-10 isoform 1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.658
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.