STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM26FUncharacterized protein. (143 aa)    
Predicted Functional Partners:
C1orf109
Chromosome 1 open reading frame 109.
   
    0.566
LOC100406244
GB1/RHD3-type G domain-containing protein.
   
  
 0.492
GBP6
Guanylate binding protein family member 6.
   
  
 0.492
CWC25
CWC25 spliceosome associated protein homolog.
   
    0.487
LINGO3
Leucine rich repeat and Ig domain containing 3.
   
    0.485
FBXO47
F-box protein 47.
   
    0.483
LIX1L
Limb and CNS expressed 1 like.
   
    0.452
LIX1
Protein limb expression 1 homolog.
   
    0.452
TICAM1
TIR domain-containing adapter molecule 1; Involved in innate immunity against invading pathogens. Component of a multi-helicase-TICAM1 complex that acts as a cytoplasmic sensor of viral double-stranded RNA (dsRNA) and plays a role in the activation of a cascade of antiviral responses including the induction of proinflammatory cytokines.
      
 0.448
ACOT12
Acyl-CoA thioesterase 12.
   
    0.441
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.