STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VCPIP1Valosin containing protein interacting protein 1. (1222 aa)    
Predicted Functional Partners:
VCP
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
   
 
 0.974
NSFL1C
NSFL1 cofactor p47 isoform d.
   
 
 0.969
NPLOC4
Nuclear protein localization protein 4 homolog.
    
 
 0.959
UFD1
Uncharacterized protein.
    
 
 0.957
UBXN2B
UBX domain protein 2B.
   
 
 0.954
UBXN7
UBX domain-containing protein 7.
   
 
 0.945
UBXN2A
UBX domain-containing protein 2A.
   
 
 0.938
FAAP100
Fanconi anemia-associated protein of 100 kDa isoform b.
    
 
 0.783
SPATA5L1
Spermatogenesis-associated protein 5-like protein 1.
   
 
 0.702
SPATA5
Spermatogenesis associated 5.
   
 
 0.702
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.