STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC1A6Amino acid transporter. (564 aa)    
Predicted Functional Partners:
SLC1A1
Excitatory amino acid transporter 3.
  
  
0.914
KAT5
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
     
  0.900
SLC7A1
High affinity cationic amino acid transporter 1.
   
 
 0.699
SLC7A5
Solute carrier family 7 member 5.
   
 
 0.695
SLC3A2
Solute carrier family 3 member 2.
   
 
 0.680
SLC38A9
Putative sodium-coupled neutral amino acid transporter 9 isoform 1.
    
 
 0.674
SLC3A1
Solute carrier family 3 member 1.
   
 
 0.625
XPR1
Xenotropic and polytropic retrovirus receptor 1.
      
 0.609
SPTBN2
Spectrin beta chain; Belongs to the spectrin family.
   
  
 0.597
SLC5A6
Sodium-dependent multivitamin transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
   
  
 0.581
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.