STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIPARPTCDD inducible poly(ADP-ribose) polymerase. (680 aa)    
Predicted Functional Partners:
COPS2
COP9 signalosome complex subunit 2 isoform 2.
      
 0.620
TMEM244
Transmembrane protein 244.
      
 0.619
RASGEF1C
RasGEF domain family member 1C.
      
 0.619
C1orf115
Chromosome 1 open reading frame 115.
      
 0.619
FOXN2
Forkhead box protein N2.
      
 0.615
LYZL4
Lysozyme like 4; Belongs to the glycosyl hydrolase 22 family.
      
 0.614
HECTD1
HECT domain E3 ubiquitin protein ligase 1.
    
 
 0.574
DUSP13
Uncharacterized protein; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
   
  
 0.569
KIF16B
Kinesin family member 16B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.564
ZFAND5
AN1-type zinc finger protein 5.
      
 0.548
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.