STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM6RNA-binding protein 6 isoform 1. (1121 aa)    
Predicted Functional Partners:
SUGP1
SURP and G-patch domain-containing protein 1.
   
 0.807
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
 0.749
RBM25
RNA binding motif protein 25.
   
 
 0.730
RBM39
RNA binding motif protein 39.
   
 0.729
DHX15
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
   
 0.714
DHX38
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.
   
 0.645
NOL6
Nucleolar protein 6.
   
 
 0.644
GPKOW
G patch domain and KOW motifs-containing protein.
   
 
 0.640
DDX10
RNA helicase.
    
 0.635
NOM1
Nucleolar MIF4G domain-containing protein 1.
   
   0.610
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.