STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX60DExD/H-box helicase 60. (1711 aa)    
Predicted Functional Partners:
DDX58
Putative ATP-dependent RNA helicase DDX58.
   
 
 0.897
TTC37
Tetratricopeptide repeat domain 37.
   
 0.856
EXOSC10
Exosome component 10.
   
 0.855
IFIH1
Interferon induced with helicase C domain 1.
   
 
 0.852
EXOSC9
Exosome complex component RRP45 isoform 2.
   
 0.834
EXOSC2
Exosome component 2.
   
 0.833
EXOSC1
Exosome complex component CSL4.
   
 0.819
EXOSC7
Exosome complex component RRP42.
   
 0.818
EXOSC8
Exosome component 8.
   
 0.807
EXOSC3
Exosome component 3.
   
 0.804
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.