STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCN3Chloride channel protein. (885 aa)    
Predicted Functional Partners:
EXOSC10
Exosome component 10.
     
 0.780
FBF1
Fas binding factor 1.
      
 0.752
NMNAT3
Nicotinamide-nucleotide adenylyltransferase.
      
 0.720
OSTM1
Osteopetrosis associated transmembrane protein 1 (Predicted).
   
 0.706
VPS33A
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
      
 0.698
SLC17A9
Solute carrier family 17 member 9.
      
 0.679
SLC4A4
Anion exchange protein.
   
  
 0.638
ZNF563
Uncharacterized protein.
      
 0.620
CYYR1
Cysteine and tyrosine-rich protein 1.
      
 0.620
ITSN2
Intersectin 2.
      
 0.614
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.