STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CASZ1Castor zinc finger 1. (1754 aa)    
Predicted Functional Partners:
N4BP1
NEDD4 binding protein 1.
      
 0.582
IL1RAPL1
Interleukin 1 receptor accessory protein like 1.
      
 0.580
ZFP1
ZFP1 zinc finger protein.
      
 0.546
ARHGDIA
Rho GDP-dissociation inhibitor 1 isoform a.
      
 0.501
CCAR1
Cell division cycle and apoptosis regulator protein 1.
      
 0.497
FAM151B
Family with sequence similarity 151 member B.
      
 0.482
FAM151A
Family with sequence similarity 151 member A.
      
 0.482
SH2B3
SH2B adaptor protein 3.
      
 0.476
FOXN4
Forkhead box N4.
    
 
 0.454
MAP3K8
Mitogen-activated protein kinase kinase kinase 8.
      
 0.449
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.