STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIN54Lin-54 DREAM MuvB core complex component. (749 aa)    
Predicted Functional Partners:
LIN52
Lin-52 DREAM MuvB core complex component.
    
 0.999
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.993
LIN37
Lin-37 DREAM MuvB core complex component.
   
 0.991
LIN9
Protein lin-9 homolog isoform 1.
   
 0.990
MYBL2
MYB proto-oncogene like 2.
    
 0.983
FOXM1
Forkhead box M1.
    
 0.951
E2F4
E2F_TDP domain-containing protein.
   
 0.894
RB1
Retinoblastoma-associated protein.
   
 0.868
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.860
RBL2
RB transcriptional corepressor like 2.
   
 0.843
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.