STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUL9Cullin-9; Belongs to the cullin family. (2520 aa)    
Predicted Functional Partners:
CUL7
Cullin 7; Belongs to the cullin family.
  
0.889
RBX1
E3 ubiquitin-protein ligase RBX1.
    
 0.870
ENSCJAP00000073823
Zf-rbx1 domain-containing protein.
    
 0.845
CUL3
Cullin-3 isoform 1; Belongs to the cullin family.
   
 0.681
CUL2
Cullin 2; Belongs to the cullin family.
    
 
 0.670
TRIP12
Uncharacterized protein.
   
 
 0.651
UBE2F
NEDD8-conjugating enzyme UBE2F isoform 1; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.632
UBA3
NEDD8-activating enzyme E1 catalytic subunit isoform 1.
     
 0.627
NAE1
NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-NAE1 E1 enzyme. E1 activates NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-UBA3 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of UBE2M. Belongs to the ubiquitin-activating E1 family. ULA1 subfamily.
    
 0.616
CUL5
Cullin-5; Belongs to the cullin family.
   
  
 0.609
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.