STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NKX6-1NK6 homeobox 1. (366 aa)    
Predicted Functional Partners:
IRX2
Iroquois homeobox 2.
      
 0.557
PDX1
Homeobox domain-containing protein.
  
0.505
PTF1A
Pancreas associated transcription factor 1a.
      
 0.501
HNF1B
HNF1 homeobox B.
    
 
 0.501
POU3F3
POU domain protein.
   
  
 0.467
FOXK1
Forkhead box K1.
      
 0.459
FOXA2
Forkhead box A2.
      
 0.453
LHX4
LIM homeobox 4.
    
 
 0.453
UCN3
Urocortin-3 preproprotein.
   
  
 0.441
INS
Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
      
 0.435
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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