STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL1339S ribosomal protein L13, mitochondrial; Belongs to the universal ribosomal protein uL13 family. (178 aa)    
Predicted Functional Partners:
MRPL21
Mitochondrial ribosomal protein L21.
  
 
 0.958
MRPL17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.953
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.952
ENSCJAP00000077762
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.952
ENSCJAP00000078156
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.952
ENSCJAP00000078253
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.952
MRPL4
Mitochondrial ribosomal protein L4.
  
 0.950
MRPL12
39S ribosomal protein L12, mitochondrial.
  
 
 0.949
MRPL20
Mitochondrial ribosomal protein L20.
  
 
 0.949
MRPL19
39S ribosomal protein L19, mitochondrial.
  
 
 0.948
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.