STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USF1Upstream stimulatory factor 1 isoform 1. (310 aa)    
Predicted Functional Partners:
USF2
Upstream transcription factor 2, c-fos interacting.
  
 
0.971
ENSCJAP00000063193
General transcription factor IIi.
    
 
 0.832
SP1
Transcription factor Sp1 isoform a.
    
 0.734
EP300
E1A binding protein p300.
    
 0.733
CREBBP
CREB-binding protein isoform a.
    
 0.686
OCA2
OCA2 melanosomal transmembrane protein.
      
 0.639
TYR
Tyrosinase.
    
 0.633
NOG
Noggin; Inhibitor of bone morphogenetic proteins (BMP) signaling which is required for growth and patterning of the neural tube and somite.
      
 0.572
FOXP2
Forkhead box P2.
      
 0.568
YY1
Transcriptional repressor protein YY1.
    
 0.552
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.