Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ARHGAP30Rho GTPase activating protein 30. (1103 aa)    
Predicted Functional Partners:
CORO1A
Coronin; Belongs to the WD repeat coronin family.
   
  
 0.856
SASH3
SAM and SH3 domain-containing protein 3.
   
  
 0.823
LAPTM5
Lysosomal-associated transmembrane protein 5.
   
  
 0.745
RHOU
Rho-related GTP-binding protein RhoU.
   
 0.670
WAS
WASP actin nucleation promoting factor.
   
 
 0.659
ITSN1
Intersectin 1.
    
 0.643
CDC42
Cell division control protein 42 homolog isoform 1.
   
 0.596
ENSCJAP00000069652
Uncharacterized protein.
   
 0.596
ENSCJAP00000073331
Uncharacterized protein.
   
 0.596
PTPRC
Protein tyrosine phosphatase receptor type C.
   
  
 0.594
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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