STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MANFMesencephalic astrocyte derived neurotrophic factor. (178 aa)    
Predicted Functional Partners:
HSPA5
78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family.
   
 
 0.977
CRELD2
Cysteine rich with EGF like domains 2.
   
  
 0.849
DNAJB11
J domain-containing protein.
   
 
 0.832
ANKRD45
ANK_REP_REGION domain-containing protein.
   
 
 0.752
SDF2L1
Stromal cell-derived factor 2-like protein 1.
   
  
 0.743
VSNL1
Visinin like 1.
     
 0.729
F7I1P9_CALJA
Reticulon.
    
 
 0.662
XBP1
BZIP domain-containing protein.
   
  
 0.659
PPARGC1A
PPARG coactivator 1 alpha.
      
 0.657
HSP90B1
HATPase_c domain-containing protein.
   
  
 0.656
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.