Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKAP6A-kinase anchoring protein 6. (2320 aa)    
Predicted Functional Partners:
RYR2
Ryanodine receptor 2.
   
 
 0.831
SLC35F3
Solute carrier family 35 member F3.
      
 0.776
AKAP5
A-kinase anchor protein 5.
      
 0.775
AKAP14
Uncharacterized protein.
      
 0.700
RABAC1
PRA1 family protein.
      
 0.691
RYR1
Ryanodine receptor 1.
   
 
 0.690
AKAP7
A-kinase anchoring protein 7.
      
 0.689
AKAP1
A-kinase anchoring protein 1.
      
 0.682
PDE4D
Phosphodiesterase.
    
 
 0.638
PDE4C
Phosphodiesterase.
    
 
 0.631
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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