STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YIPF3Yip1 domain family member 3. (391 aa)    
Predicted Functional Partners:
YIPF5
Protein YIPF.
   
 
 0.894
YIPF4
Protein YIPF.
   
 
 0.803
YIPF6
Protein YIPF.
   
 
 0.673
YIPF1
Protein YIPF.
   
  
 0.554
YIPF2
Protein YIPF.
   
  
 0.540
SELENOS
Uncharacterized protein.
   
 
 0.540
YIPF7
Protein YIPF.
   
 
 0.540
SLC38A7
Putative sodium-coupled neutral amino acid transporter 7.
      
 0.530
RPAP2
RNA polymerase II associated protein 2.
      
 0.427
CDRT4
CMT1A duplicated region transcript 4.
   
 
 0.411
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.