STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NLRP6NLR family pyrin domain containing 6. (895 aa)    
Predicted Functional Partners:
NLRP1
NLR family pyrin domain containing 1.
     
0.877
AIM2
Absent in melanoma 2.
   
 
 0.847
MEFV
Pyrin domain-containing protein.
   
 0.817
CASP1
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.776
PKP3
Plakophilin 3.
      
 0.724
NLRP12
NLR family pyrin domain containing 12.
  
   
0.659
ENSCJAP00000073487
Uncharacterized protein.
   
 0.651
NLRP3
NLR family pyrin domain containing 3.
      
0.645
PGGHG
Protein-glucosylgalactosylhydroxylysine glucosidase.
 
    
 0.633
NLRP7
NACHT domain-containing protein.
      
0.598
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.