STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CILP2Cartilage intermediate layer protein 2. (1162 aa)    
Predicted Functional Partners:
FITM1
Fat storage inducing transmembrane protein 1.
      
 0.694
LRRC10
Leucine rich repeat containing 10.
      
 0.691
VWA5A
Von Willebrand factor A domain containing 5A.
      
 0.691
MTBP
MDM2 binding protein.
      
 0.606
HPGD
15-hydroxyprostaglandin dehydrogenase [NAD(+)] isoform 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.581
CCN4
Cellular communication network factor 4.
   
  
 0.566
ADAM12
ADAM metallopeptidase domain 12.
      
 0.563
TCF21
Transcription factor 21.
      
 0.511
LOC100410987
Cytochrome c oxidase assembly protein COX15 homolog isoform 1.
      
 0.495
C5orf58
Chromosome 5 open reading frame 58.
      
 0.487
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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