Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
C2orf88Chromosome 2 open reading frame 88. (95 aa)    
Predicted Functional Partners:
PRKAR1A
Protein kinase cAMP-dependent type I regulatory subunit alpha.
    
 
 0.688
PRKAR1B
Protein kinase cAMP-dependent type I regulatory subunit beta.
    
 
 0.688
PRKAR2B
Protein kinase cAMP-dependent type II regulatory subunit beta.
    
 
 0.507
AKAP11
A-kinase anchoring protein 11.
      
 0.491
AKAP7
A-kinase anchoring protein 7.
      
 0.487
PRKAR2A
Protein kinase cAMP-dependent type II regulatory subunit alpha.
    
 
 0.474
ENSCJAP00000078980
Uncharacterized protein.
    
 
 0.474
ZFAND5
AN1-type zinc finger protein 5.
      
 0.445
AKAP17A
A-kinase anchoring protein 17A.
      
 0.427
AKAP10
A-kinase anchor protein 10, mitochondrial.
      
 0.427
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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