STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REEP6Receptor expression-enhancing protein. (211 aa)    
Predicted Functional Partners:
DYNC2H1
Dynein cytoplasmic 2 heavy chain 1.
      
 0.770
SNX15
Sorting nexin 15.
    
   0.766
RTN2
Reticulon.
    
 
 0.648
RTN3
Reticulon.
    
 
 0.648
F7I1P9_CALJA
Reticulon.
    
 
 0.648
RTN4
Reticulon.
    
 
 0.648
PRPF31
PRP31 pre-mRNA processing factor 31 homolog (Predicted).
      
 0.620
TPI1
Triosephosphate isomerase.
   
  
 0.612
LNPK
Lunapark, ER junction formation factor.
    
 
 0.604
RHBDD3
Rhomboid domain-containing protein 3.
      
 0.595
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.