STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SWSAP1SWIM-type zinc finger 7 associated protein 1. (283 aa)    
Predicted Functional Partners:
ZSWIM7
Zinc finger SWIM-type containing 7.
    
 
 0.813
HSF2BP
Heat shock transcription factor 2 binding protein.
      
 0.637
RAD51D
DNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA breaks arising during DNA replication or induced by DNA-damaging agents; Belongs to the RecA family. RAD51 subfamily.
    
 
 0.601
MEIOB
Meiosis specific with OB-fold.
      
 0.569
MSH4
MutS homolog 4.
      
 0.560
TRIP13
Thyroid hormone receptor interactor 13; Belongs to the AAA ATPase family.
    
 
 0.557
SPIDR
DUF4503 domain-containing protein.
    
 
 0.510
XRCC3
DNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA, thought to repair chromosomal fragmentation, translocations and deletions; Belongs to the RecA family. RAD51 subfamily.
    
 
 0.507
PDS5B
Sister chromatid cohesion protein PDS5 homolog B.
      
 0.507
GPS1
COP9 signalosome complex subunit 1 isoform 1.
      
 0.487
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.