STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRRG4Transmembrane gamma-carboxyglutamic acid protein 4. (224 aa)    
Predicted Functional Partners:
DSCC1
DNA replication and sister chromatid cohesion 1.
      
 0.549
IRF6
Interferon regulatory factor 6 isoform 1.
      
 0.544
SCRT1
Uncharacterized protein.
      
 0.531
MKX
Homeobox protein Mohawk.
      
 0.495
RAB3GAP2
RAB3 GTPase activating non-catalytic protein subunit 2.
      
 0.493
QSER1
Glutamine and serine rich 1.
 
    
 0.487
ATRX
Uncharacterized protein.
      
 0.480
NANOS1
Nanos C2HC-type zinc finger 1; Belongs to the nanos family.
      
 0.465
GATAD2B
GATA zinc finger domain containing 2B.
      
 0.465
NDFIP1
Nedd4 family interacting protein 1.
      
 0.457
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.