STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF11BTNF receptor superfamily member 11b. (405 aa)    
Predicted Functional Partners:
TNFSF11
Tumor necrosis factor ligand superfamily member.
   
 0.998
TNFSF18
Tumor necrosis factor ligand 2A.
   
 0.829
TNFSF15
Tumor necrosis factor ligand 1B.
   
 0.732
TNFSF14
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
   
 0.720
CD40LG
CD40 ligand, membrane form; Cytokine that acts as a ligand to CD40/TNFRSF5 (By similarity). Costimulates T-cell proliferation and cytokine production (By similarity). Its cross-linking on T-cells generates a costimulatory signal which enhances the production of IL4 and IL10 in conjunction with the TCR/CD3 ligation and CD28 costimulation (By similarity). Induces the activation of NF-kappa-B (By similarity). Induces the activation of kinases MAPK8 and PAK2 in T-cells (By similarity). Mediates B-cell proliferation in the absence of co-stimulus as well as IgE production in the presence of [...]
   
 0.685
BTLA
B and T lymphocyte associated.
   
 0.657
LTA
Lymphotoxin alpha; Belongs to the tumor necrosis factor family.
   
 0.623
OR10J1
Olfactory receptor.
    
 0.610
TNFRSF11A
TNF receptor superfamily member 11a.
   
0.581
FOSL1
FOS like 1, AP-1 transcription factor subunit.
      
 0.546
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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