STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MACROH2A1Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. (372 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.980
KDM6A
Lysine demethylase 6A.
  
 0.825
PARP1
Poly [ADP-ribose] polymerase.
    
 
 0.823
SPOP
Speckle type BTB/POZ protein.
   
 
 0.816
KDM6B
Lysine-specific demethylase 6B.
  
 0.801
GLYR1
Glyoxylate reductase 1 homolog.
    
 
 0.745
LOC100394455
Histone H3; Belongs to the histone H3 family.
 
 
 0.722
H2BC1
Histone H2B; Belongs to the histone H2B family.
 
 
 0.705
H2BU1
Histone H2B; Belongs to the histone H2B family.
 
 
 0.705
H2BE1
Histone H2B; Belongs to the histone H2B family.
 
 
 0.705
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.