Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
PPEF1Serine/threonine-protein phosphatase with EF-hands. (651 aa)    
Predicted Functional Partners:
RHO
Rhodopsin.
   
 0.807
EFCAB3
EF-hand calcium binding domain 3.
   
 0.750
EFHB
EF-hand domain family member B.
   
  
 0.710
EFCAB2
EF-hand calcium binding domain 2.
    
 0.680
EFCAB5
EF-hand calcium binding domain 5.
    
 0.677
ASB12
Ankyrin repeat and SOCS box containing 12.
    
 0.620
EFHC2
EF-hand domain-containing family member C2.
   
  
 0.607
PWWP2B
PWWP domain containing 2B.
      
 0.606
ATP8B2
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
   
 
 0.601
RLIM
Ring finger protein, LIM domain interacting.
   
  
 0.587
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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