STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSACCTSSK6 activating cochaperone. (125 aa)    
Predicted Functional Partners:
ARMH4
Armadillo like helical domain containing 4.
      
 0.594
NUPR2
Nuclear protein 2, transcriptional regulator.
      
 0.542
FOXP2
Forkhead box P2.
    
   0.532
GNGT2
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
      
 0.521
PIP
Prolactin induced protein.
      
 0.485
CATSPERG
Cation channel sperm associated auxiliary subunit gamma.
      
 0.478
SPATA16
Spermatogenesis associated 16.
      
 0.437
CISD3
CDGSH iron-sulfur domain-containing protein 3, mitochondrial.
      
 0.433
SERPINE3
Serpin family E member 3; Belongs to the serpin family.
      
 0.416
DNAAF1
Dynein assembly factor 1, axonemal.
      
 0.415
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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