STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC30A8Solute carrier family 30 member 8. (369 aa)    
Predicted Functional Partners:
CDKAL1
CDK5 regulatory subunit associated protein 1 like 1.
      
 0.857
HHEX
Hematopoietically-expressed homeobox protein HHEX.
      
 0.824
ENSCJAP00000065650
Transcription factor 7 like 2.
     
 0.760
CREB3L1
Cyclic AMP-responsive element-binding protein 3-like protein 1.
    
   0.724
SLC35D3
Solute carrier family 35 member D3.
   
  
 0.697
PTPRN
Protein tyrosine phosphatase receptor type N.
      
 0.692
LARP6
HTH La-type RNA-binding domain-containing protein.
      
 0.691
ABCC8
ATP binding cassette subfamily C member 8.
      
 0.690
KCNJ11
ATP-sensitive inward rectifier potassium channel 11 isoform 1.
      
 0.690
LYPLAL1
Lysophospholipase like 1.
      
 0.686
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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