STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCC6ATP binding cassette subfamily C member 6. (1463 aa)    
Predicted Functional Partners:
GGCX
Gamma-glutamyl carboxylase.
   
 
 0.730
ABCG2
ATP-binding cassette sub-family G member 2 isoform 1.
   
 0.593
ENSCJAP00000068236
UBIQUITIN_CONJUGAT_2 domain-containing protein.
     
 0.538
UBE2V1
TMEM189_B_dmain domain-containing protein.
     
 0.538
ABCG5
ATP binding cassette subfamily G member 5.
   
 0.532
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.515
ENPP1
Ectonucleotide pyrophosphatase/phosphodiesterase 1.
   
 
 0.488
ABCB1
ATP binding cassette subfamily B member 1.
   
0.467
ABCF1
ATP-binding cassette sub-family F member 1 isoform a.
  
 
 0.458
KCNJ9
Potassium voltage-gated channel subfamily J member 9.
   
 0.456
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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