STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAD21Double-strand-break repair protein rad21 homolog. (631 aa)    
Predicted Functional Partners:
SMC1A
Structural maintenance of chromosomes protein.
   
 0.999
SMC3
Structural maintenance of chromosomes protein.
   
 0.999
STAG2
Cohesin subunit SA-2 isoform a.
   
 0.999
STAG1
Stromal antigen 1.
   
 0.999
SMC1B
Structural maintenance of chromosomes protein.
   
 0.994
ESPL1
Extra spindle pole bodies like 1, separase.
   
 0.987
PDS5A
Sister chromatid cohesion protein PDS5 homolog A isoform 1.
   
 0.983
NIPBL
Nipped-B protein.
   
 0.980
PDS5B
Sister chromatid cohesion protein PDS5 homolog B.
   
 0.975
STAG3
Stromal antigen 3.
   
 0.967
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.