STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPANBrix domain-containing protein. (463 aa)    
Predicted Functional Partners:
SURF6
Surfeit 6.
   
 
 0.940
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family.
   
 
 0.936
P2RY11
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
 
    
 0.935
RPF1
Ribosome production factor 1 homolog.
   
 
 0.928
DDX27
DEAD-box helicase 27; Belongs to the DEAD box helicase family.
   
   0.919
EBNA1BP2
EBNA1 binding protein 2.
   
 
 0.914
RBM28
RNA-binding protein 28 isoform 1.
   
   0.910
WDR74
WD repeat-containing protein 74.
   
 
 0.910
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
   0.903
RPF2
Ribosome production factor 2 homolog.
   
 
 0.901
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (28%) [HD]