STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FASTKD2FAST kinase domains 2. (749 aa)    
Predicted Functional Partners:
NGRN
Neugrin, neurite outgrowth associated.
    
 
 0.787
MTERF3
Mitochondrial transcription termination factor 3.
   
 
 0.748
DDX28
DEAD-box helicase 28.
   
 
 0.734
TRUB2
TruB pseudouridine synthase family member 2.
   
 
 0.726
RPUSD4
RNA pseudouridine synthase D4.
   
 
 0.686
RPUSD3
RNA pseudouridine synthase D3.
   
 
 0.638
FASTKD3
FAST kinase domains 3.
   
 
0.605
SUPV3L1
ATP-dependent RNA helicase SUPV3L1, mitochondrial.
   
  
 0.599
DHX30
Uncharacterized protein.
   
  
 0.565
FASTKD1
FAST kinase domains 1.
      
0.558
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.