STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPLD1Glycosylphosphatidylinositol specific phospholipase D1. (840 aa)    
Predicted Functional Partners:
SERPINA4
Serpin family A member 4; Belongs to the serpin family.
   
  
 0.610
ITGB8
Integrin beta; Belongs to the integrin beta chain family.
   
 0.602
PI16
Peptidase inhibitor 16; Belongs to the CRISP family.
   
  
 0.584
CLEC3B
C-type lectin domain family 3 member B.
     
 0.573
F13B
Coagulation factor XIII B chain.
     
 0.569
APOM
Apolipoprotein M isoform 1.
   
  
 0.538
HRG
Histidine rich glycoprotein.
    
 0.526
FGB
Fibrinogen beta chain.
    
 0.524
CFI
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 
 0.524
CRTAC1
Cartilage acidic protein 1.
      
 0.519
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.