STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HAPLN2Hyaluronan and proteoglycan link protein 2. (341 aa)    
Predicted Functional Partners:
ERMN
Ermin.
   
  
 0.810
CHST7
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.544
NIPAL4
NIPA like domain containing 4.
      
 0.516
CASKIN1
CASK interacting protein 1.
   
 
 0.495
FA2H
Fatty acid 2-hydroxylase; Catalyzes stereospecific hydroxylation of free fatty acids at the C-2 position to produce (R)-2-hydroxy fatty acids, which are building blocks of sphingolipids and glycosphingolipids common in neural tissue and epidermis. Plays an essential role in the synthesis of galactosphingolipids of the myelin sheath. Responsible for the synthesis of sphingolipids and glycosphingolipids involved in the formation of epidermal lamellar bodies critical for skin permeability barrier. Participates in the synthesis of glycosphingolipids and a fraction of type II wax diesters i [...]
   
  
 0.477
DOC2A
Double C2-like domain-containing protein.
   
  
 0.467
PRKAR2B
Protein kinase cAMP-dependent type II regulatory subunit beta.
      
 0.463
STXBP5
Syntaxin binding protein 5.
      
 0.459
LRRC7
Leucine rich repeat containing 7.
    
 
 0.456
KIF21A
Kinesin-like protein KIF21A isoform 1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.438
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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