STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC8ELeucine-rich repeat-containing protein 8E isoform 1. (796 aa)    
Predicted Functional Partners:
LRRC8A
Leucine rich repeat containing 8 VRAC subunit A.
   
 0.977
MRC2
Mannose receptor C type 2.
    
 0.830
ZNF358
Zinc finger protein 358.
    
 0.823
TTC8
Tetratricopeptide repeat domain 8.
    
 
 0.794
LRRC8B
Leucine rich repeat containing 8 VRAC subunit B.
    
 0.765
RABEPK
Rab9 effector protein with kelch motifs isoform a.
      
 0.755
TRIM2
Tripartite motif-containing protein 2; E3 ubiquitin-protein ligase that mediates the ubiquitination of phosphorylated BCL2L11. Also mediates the UBE2D1-dependent ubiquitination of NEFL. Plays a neuroprotective function. May play a role in neuronal rapid ischemic tolerance.
    
  0.733
ALDH6A1
Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial.
    
 
 0.726
CORIN
Corin, serine peptidase.
   
 0.686
TRIM3
Tripartite motif containing 3.
    
 0.681
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.