STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFF1AF4/FMR2 family member 1. (1222 aa)    
Predicted Functional Partners:
CDK9
Cyclin dependent kinase 9; Belongs to the protein kinase superfamily.
    
 0.984
ELL2
Elongation factor for RNA polymerase II 2.
   
 0.979
MLLT1
MLLT1 super elongation complex subunit.
    
 0.965
ELL3
Elongation factor RNA polymerase II-like 3 (Predicted).
   
 0.963
ELL
Elongation factor for RNA polymerase II.
   
 0.957
EAF1
ELL associated factor 1.
    
 0.938
CCNT1
Cyclin T1; Belongs to the cyclin family.
   
 0.935
MLLT3
MLLT3 super elongation complex subunit.
    
 0.934
CCNT2
Cyclin-T2 isoform b; Belongs to the cyclin family.
   
 0.917
AFF4
AF4/FMR2 family member 4.
    
0.897
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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