STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAGLN2Transgelin; Belongs to the calponin family. (220 aa)    
Predicted Functional Partners:
VCL
Vinculin.
   
 
 0.819
ACTR2
Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.
   
 0.816
SMTN
Smoothelin.
   
  
 0.606
MYL9
Myosin regulatory light polypeptide 9 isoform a.
   
 0.588
WDR1
WD_REPEATS_REGION domain-containing protein.
   
 
 0.570
FLNA
Filamin A.
   
 
 0.523
EFHB
EF-hand domain family member B.
   
   0.518
PACRGL
PACRG-like protein isoform 3.
    
 
 0.511
PACRG
Parkin coregulated.
    
 
 0.511
EFHC1
EF-hand domain-containing protein 1 isoform 1.
   
 
 0.510
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.