STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF177Zinc finger protein 177 isoform a. (480 aa)    
Predicted Functional Partners:
SHKBP1
SH3KBP1-binding protein 1.
      
 0.547
MAMLD1
Mastermind like domain containing 1.
   
 0.537
TFB2M
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
    
 
 0.527
NUMBL
NUMB like endocytic adaptor protein.
    
 0.522
FOXP2
Forkhead box P2.
    
 0.507
DOT1L
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
      
 0.488
SHE
Src homology 2 domain containing E.
      
 0.468
SLC27A5
Solute carrier family 27 member 5.
      
 0.460
ETV7
ETS variant 7.
    
 
 0.448
DNTT
DNA nucleotidylexotransferase; Template-independent DNA polymerase which catalyzes the random addition of deoxynucleoside 5'-triphosphate to the 3'-end of a DNA initiator.
    
 
 0.429
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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