STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF426Zinc finger protein 426. (555 aa)    
Predicted Functional Partners:
FBXL12
F-box/LRR-repeat protein 12.
   
 
 0.778
CCDC88C
Coiled-coil domain containing 88C.
      
 0.725
TBC1D21
TBC1 domain family member 21.
      
 0.725
TINAGL1
Tubulointerstitial nephritis antigen like 1; Belongs to the peptidase C1 family.
      
 0.620
PTGDR
Prostaglandin D2 receptor.
      
 0.620
FAT3
FAT atypical cadherin 3.
     
 0.619
WFDC12
WAP four-disulfide core domain protein 12; Antibacterial protein. Putative acid-stable proteinase inhibitor (By similarity).
      
 0.497
BTBD11
Ankyrin repeat and BTB/POZ domain-containing protein BTBD11 isoform a.
    
 0.460
PDSS2
Decaprenyl-diphosphate synthase subunit 2; Belongs to the FPP/GGPP synthase family.
      
 0.439
HELB
DNA helicase B.
     
 0.437
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.