STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDGFHeparin binding growth factor. (256 aa)    
Predicted Functional Partners:
MDK
Midkine isoform a.
      
 0.732
CDK13
Cyclin dependent kinase 13.
    
 
 0.551
CDK12
Cyclin-dependent kinase 12 isoform 1.
    
 
 0.551
SDAD1
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
      
 0.549
ZNF451
Zinc finger protein 451.
    
 
 0.535
RRP15
Uncharacterized protein.
      
 0.533
LRIF1
Uncharacterized protein.
      
 0.532
SRBD1
S1 RNA binding domain 1.
   
  
 0.513
ZNF512
Zinc finger protein 512 isoform a.
    
 
 0.500
PTN
Uncharacterized protein.
   
  
 0.492
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.